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AC arboreto

Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use when analyzing transcriptomics data (bulk RNA-seq, single-cell RNA-seq) to identify transcription factor-target gene relationships and regulatory interactions. Supports distributed computation for large-scale datasets.

FreedomIntelligence/OpenClaw-Medical-Skills Agent Skills author: FreedomIntelligence 5 files · 1 script body ≈ 1 622 tokens Open the sourcegithub.com↗ analyzed 12 h ago

Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).

As a process C 60/100 · Has gaps — weak spots: when it triggers, inputs and preconditions, progress reporting

AnalyzerData and analyticsWriting and documentstype and topics are labelled automatically from the skill text
Runs in: Claude / Claude Code ChatGPT / Codex Gemini CLI Cursor GitHub Copilot / VS Code Qwen Code Kimi Code CLI Z.ai (GLM) DeepSeek (Deep Code) Mistral Vibe LangChain (deepagents) OpenClaw Goose OpenCode
JSON
Technical rating
A
98/100
safety, quality, tests
Safety 60%
100
Quality 40%
94
Run on models
none yet
Process rating
C
60/100
Has gaps
Inputs and preconditions w 11
0
Progress reporting w 2
0
When it triggers w 12
20
the three weakest of ten parameters · all ten

The same skill appears in 1 more place: RA-Skills

How to improve

    For the model run — optional
    • Your own cases (evals/evals.json, 4–6 real requests with expected answers): the full check would then run those instead of a model-drafted suite.
    • A spec.yaml with trigger phrases and assertions — a behaviour contract for CI; `skilltest init` writes a template.

    Guard findings · 0

    ✓ No critical or high findings

    Files scanned: 5. Evidence is masked. Grey chips explain why severity was lowered.

    Against the Agent Skills spec

    ✓ No remarks against the Agent Skills spec

    Process rating: all ten parameters 60/100

    • 0Inputs and preconditions. Does not say what the process needs to start
    • 0Progress reporting. Says nothing while it works
    • 20When it triggers. No condition that starts the skill
    • 50Failures and branches. 0 branches, has a failure section
    • 60Tools and files. Uses tools (node) that frontmatter does not declare
    • 60Result and completion. Output format stated, no completion criterion
    • 100Steps. 13 steps
    • 100Consistency. Name and required fields are in place
    • 100Execution cost. Instruction body is 1622 tokens
    • 100Running it twice. No mutating operations

    Everything here is measured from the skill text rather than judged by a model, so the numbers are checkable. A parameter weighs more when it is a more common reason for the process to stall.

    Quality signals

    • +5Description has no quoted example phrases that should trigger the skill
    • +4Description does not say when NOT to use the skill (false activations)
    • +1No license
    • +2Single-language instructions
    • +3Description length 333: enough signal without eating the budget
    • +4Structure: 16 headings
    • +3Step-by-step instructions: 13 items
    • +3Output format is stated explicitly
    • +4Has examples (14 code blocks)
    • +4Reference files are cited in the instructions (3 of 3)
    • +3All 1 scripts are documented

    Quality base 70; lint remarks subtract, signals add up to 100. Result: 94.