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BC tooluniverse-expression-data-retrieval

Retrieves gene expression and omics datasets from ArrayExpress and BioStudies with gene disambiguation, experiment quality assessment, and structured reports. Creates comprehensive dataset profiles with metadata, sample information, and download links. Use when users need expression data, omics datasets, or mention ArrayExpress (E-MTAB, E-GEOD) or BioStudies (S-BSST) accessions.

FreedomIntelligence/OpenClaw-Medical-Skills Agent Skills author: FreedomIntelligence 3 files body ≈ 2 445 tokens Open the sourcegithub.com↗ analyzed 14 h ago

Retrieves gene expression and omics datasets from ArrayExpress and BioStudies with gene disambiguation, experiment quality assessment, and structured reports.

As a process C 52/100 · Has gaps — References files that are not bundled: link

ProcedureData and analyticstype and topics are labelled automatically from the skill text
Runs in: Claude / Claude Code ChatGPT / Codex Gemini CLI Cursor GitHub Copilot / VS Code Qwen Code Kimi Code CLI Z.ai (GLM) DeepSeek (Deep Code) Mistral Vibe LangChain (deepagents) OpenClaw Goose OpenCode
JSON
Technical rating
B
92/100
safety, quality, tests
Safety 60%
100
Quality 40%
81
Run on models
none yet
Process rating
C
52/100
Has gaps
References files that are not bundled: link
Tools and files w 18
0
Inputs and preconditions w 11
0
Progress reporting w 2
0
the three weakest of ten parameters · all ten

How to improve

  1. The text references files that are not there: add them or drop the references.
For the model run — optional
  • Your own cases (evals/evals.json, 4–6 real requests with expected answers): the full check would then run those instead of a model-drafted suite.
  • A spec.yaml with trigger phrases and assertions — a behaviour contract for CI; `skilltest init` writes a template.

Guard findings · 0

✓ No critical or high findings

Files scanned: 3. Evidence is masked. Grey chips explain why severity was lowered.

Against the Agent Skills spec

  • warning missing-ref reference to a missing file: link

Process rating: all ten parameters 52/100

Will not run. References files that are not bundled: link
  • 0Tools and files. 1 referenced file(s) missing: link
  • 0Inputs and preconditions. Does not say what the process needs to start
  • 0Progress reporting. Says nothing while it works
  • 20When it triggers. No condition that starts the skill
  • 60Result and completion. Output format stated, no completion criterion
  • 85Steps. 22 steps, 1 vague phrases
  • 100Failures and branches. 1 branches, has a failure section
  • 100Consistency. Name and required fields are in place
  • 100Execution cost. Instruction body is 2445 tokens
  • 100Running it twice. Mutating operations check current state
  • low 11 top-level sections: this looks like several domains in one skill

Everything here is measured from the skill text rather than judged by a model, so the numbers are checkable. A parameter weighs more when it is a more common reason for the process to stall.

Quality signals

  • +5Description has no quoted example phrases that should trigger the skill
  • +4Description does not say when NOT to use the skill (false activations)
  • +1No license
  • +2Single-language instructions
  • +3Description length 381: enough signal without eating the budget
  • +4Structure: 27 headings
  • +3Step-by-step instructions: 22 items
  • +3Output format is stated explicitly
  • +4Has examples (9 code blocks)

Quality base 70; lint remarks subtract, signals add up to 100. Result: 81.