CC tooluniverse-network-pharmacology
Construct and analyze compound-target-disease networks for drug repurposing, polypharmacology discovery, and systems pharmacology. Builds multi-layer networks from ChEMBL, OpenTargets, STRING, DrugBank, Reactome, FAERS, and 60+ other ToolUniverse tools. Calculates Network Pharmacology Scores (0-100), identifies repurposing candidates, predicts mechanisms, and analyzes polypharmacology. Use when users ask about drug repurposing via network analysis, multi-target drug effects, compound-target-disease networks, systems pharmacology, or polypharmacology.
Construct and analyze compound-target-disease networks for drug repurposing, polypharmacology discovery, and systems pharmacology.
As a process C 62/100 · Has gaps — References files that are not bundled: ../tooluniverse-drug-repurposing/SKILL.md, ../tooluniverse-drug-target-validation/SKILL.md, ../tooluniverse-adverse-event-detection/SKILL.md
How to improve
- The SKILL.md body is over 5,000 tokens: move reference detail into references/ and load it when needed.
- The text references files that are not there: add them or drop the references.
- Your own cases (evals/evals.json, 4–6 real requests with expected answers): the full check would then run those instead of a model-drafted suite.
- A spec.yaml with trigger phrases and assertions — a behaviour contract for CI; `skilltest init` writes a template.
Guard findings · 0
✓ No critical or high findings
Files scanned: 3. Evidence is masked. Grey chips explain why severity was lowered.
Against the Agent Skills spec
- warning
body-longSKILL.md body ≈ 12100 tokens (recommended < 5000); move details to references/ - warning
missing-refreference to a missing file: ../tooluniverse-drug-repurposing/SKILL.md - warning
missing-refreference to a missing file: ../tooluniverse-drug-target-validation/SKILL.md - warning
missing-refreference to a missing file: ../tooluniverse-adverse-event-detection/SKILL.md - warning
missing-refreference to a missing file: ../tooluniverse-systems-biology/SKILL.md - warning
missing-refreference to a missing file: ../tooluniverse-protein-interactions/SKILL.md
Process rating: all ten parameters 62/100
- 0Tools and files. 5 referenced file(s) missing: ../tooluniverse-drug-repurposing/SKILL.md, ../tooluniverse-drug-target-validation/SKILL.md, ../tooluniverse-adverse-event-detection/SKILL.md
- 0Progress reporting. Says nothing while it works
- 30Running it twice. 2 mutating operations with no state check
- 40Execution cost. Instruction body is 12100 tokens: crowds the task out of the window
- 60Result and completion. Output format stated, no completion criterion
- 70Inputs and preconditions. Inputs and preconditions are listed
- 85Steps. 86 steps, 1 vague phrases
- 100When it triggers. States when to use and when not to
- 100Failures and branches. 1 branches, has a failure section
- 100Consistency. Name and required fields are in place
- medium Safety rules and hard prohibitions inside a skill: they belong in the system prompt, here they protect nothing
- low 12 top-level sections: this looks like several domains in one skill
Everything here is measured from the skill text rather than judged by a model, so the numbers are checkable. A parameter weighs more when it is a more common reason for the process to stall.
Quality signals
- +5Description has no quoted example phrases that should trigger the skill
- +1No license
- +2Single-language instructions
- +4Description says when NOT to use the skill
- +3Description length 556: enough signal without eating the budget
- +4Structure: 45 headings
- +3Step-by-step instructions: 86 items
- +3Output format is stated explicitly
- +4Has examples (28 code blocks)
Quality base 70; lint remarks subtract, signals add up to 100. Result: 69.