BB onekgpd
Queries the 1000 Genomes Project dataset (3,202 whole-genome-sequenced individuals, GRCh38) at the level of individual participants. Use when a question is about individuals or variants in the 1000 Genomes Project cohort: which individuals carry variants matching specific criteria in a gene or region, which individuals are homozygous-reference at a position, which variants exist in the dataset or carried by specified individuals in a gene or region, the relatedness between two specified individuals. Variants are returned with 1000 Genomes allele frequencies (AF), gnomAD v4.1 exome and genome AF, AlphaMissense score, and HGVSp annotations.
Queries the 1000 Genomes Project dataset (3,202 whole-genome-sequenced individuals, GRCh38) at the level of individual participants.
As a process B 68/100 · Nearly there — weak spots: result and completion, progress reporting
What is at stake
Medium-severity findings: the skill is probably honest, but read what alarmed the scanner.
Below is the worst case for this category. The finding here is medium: the guard saw a sign, not a proof.
The skill asks for more than the task needs: broad tool access, credential environment variables, binaries. Every extra permission widens the damage from a mistake or a compromise.
Narrow allowed-tools and the variable list to the minimum; replace binaries with readable sources or scripts.
How to improve
- The SKILL.md body is over 5,000 tokens: move reference detail into references/ and load it when needed.
- Your own cases (evals/evals.json, 4–6 real requests with expected answers): the full check would then run those instead of a model-drafted suite.
- A spec.yaml with trigger phrases and assertions — a behaviour contract for CI; `skilltest init` writes a template.
Guard findings · 1
✓ No critical or high findings
Medium and low: 1
-
medium Broad scope
meta-broad-allowed-toolsSKILL.md:1Broad tool permissions pre-approved: Bashallowed-tools: Write Bash
Files scanned: 5. Evidence is masked. Grey chips explain why severity was lowered.
Against the Agent Skills spec
- warning
body-longSKILL.md body ≈ 5328 tokens (recommended < 5000); move details to references/
Process rating: all ten parameters 68/100
- 0Result and completion. Does not say what the result is
- 0Progress reporting. Says nothing while it works
- 50When it triggers. No condition that starts the skill
- 50Failures and branches. 0 branches, has a failure section
- 70Inputs and preconditions. Inputs and preconditions are listed
- 70Execution cost. Instruction body is 5328 tokens
- 100Tools and files. Tools declared in frontmatter
- 100Steps. 63 steps
- 100Consistency. Name and required fields are in place
- 100Running it twice. No mutating operations
- low 14 top-level sections: this looks like several domains in one skill
Everything here is measured from the skill text rather than judged by a model, so the numbers are checkable. A parameter weighs more when it is a more common reason for the process to stall.
Quality signals
- +5Description has no quoted example phrases that should trigger the skill
- +3Output format is not stated: the model decides each time
- +2Single-language instructions
- +4Description says when NOT to use the skill
- +3Description length 646: enough signal without eating the budget
- +4Structure: 22 headings
- +3Step-by-step instructions: 63 items
- +4Has examples (4 code blocks)
- +4Reference files are cited in the instructions (2 of 2)
- +3All 2 scripts are documented
- +1License stated
Quality base 70; lint remarks subtract, signals add up to 100. Result: 86.