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BF fold

Submits and manages FastFold protein folding jobs via the Jobs API. Covers authentication, creating jobs, polling for completion, and fetching CIF/PDB URLs, metrics, and viewer links. Use when folding protein sequences with FastFold, calling the FastFold API, or scripting fold-and-wait workflows.

modbender/skill-library-mcp Agent Skills author: modbender MIT 11 files body ≈ 1 945 tokens Open the sourcegithub.com↗ analyzed 3 d ago

Submits and manages FastFold protein folding jobs via the Jobs API.

As a process F 34/100 · Will not run — References files that are not bundled: references/.env.example

IntegrationData and analyticstype and topics are labelled automatically from the skill text
Runs in: OpenClaw Claude / Claude Code ChatGPT / Codex Gemini CLI Cursor GitHub Copilot / VS Code Qwen Code Kimi Code CLI Z.ai (GLM) DeepSeek (Deep Code) Mistral Vibe LangChain (deepagents) Goose OpenCode
JSON
Technical rating
B
89/100
safety, quality, tests
Safety 60%
99
Quality 40%
75
Run on models
none yet
Process rating
F
34/100
Will not run
References files that are not bundled: references/.env.example
Tools and files w 18
0
Result and completion w 14
0
Inputs and preconditions w 11
0
the three weakest of ten parameters · all ten

How to improve

  1. The text references files that are not there: add them or drop the references.
For the model run — optional
  • Your own cases (evals/evals.json, 4–6 real requests with expected answers): the full check would then run those instead of a model-drafted suite.
  • A spec.yaml with trigger phrases and assertions — a behaviour contract for CI; `skilltest init` writes a template.

Guard findings · 1

✓ No critical or high findings

Medium and low: 1
  • low Secrets in code secret-high-entropy-token references/jobs.yaml:136
    High-entropy token-like string (may be an id, hash or a credential)
    huma…nd:

Files scanned: 11. Evidence is masked. Grey chips explain why severity was lowered.

Against the Agent Skills spec

  • warning missing-ref reference to a missing file: references/.env.example

Process rating: all ten parameters 34/100

Will not run. References files that are not bundled: references/.env.example
  • 0Tools and files. 1 referenced file(s) missing: references/.env.example
  • 0Result and completion. Does not say what the result is
  • 0Inputs and preconditions. Does not say what the process needs to start
  • 0Failures and branches. Linear process with no failure handling
  • 30Running it twice. 17 mutating operations with no state check
  • 40Consistency. Frontmatter name (fold) differs from the folder (fastfold-ai-fold)
  • 70When it triggers. States when to use, but not when not to
  • 85Steps. 39 steps, 1 vague phrases
  • 100Execution cost. Instruction body is 1945 tokens
  • 100Progress reporting. Reports progress
  • medium Safety rules and hard prohibitions inside a skill: they belong in the system prompt, here they protect nothing
  • low The response is described with custom markup (6 tags): a typed call is more reliable

Everything here is measured from the skill text rather than judged by a model, so the numbers are checkable. A parameter weighs more when it is a more common reason for the process to stall.

Quality signals

  • +5Description has no quoted example phrases that should trigger the skill
  • +4Description does not say when NOT to use the skill (false activations)
  • +3Output format is not stated: the model decides each time
  • +4No input/output examples
  • -32 of 7 scripts are never mentioned in SKILL.md
  • +1No license
  • +2Single-language instructions
  • +3Description length 297: enough signal without eating the budget
  • +4Structure: 10 headings
  • +3Step-by-step instructions: 39 items
  • +4Reference files are cited in the instructions (2 of 2)

Quality base 70; lint remarks subtract, signals add up to 100. Result: 75.