SKILLEMALL.ai
GitHub ↗ RU Sign in

AC scikit-bio

Biological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac), ordination (PCoA), PERMANOVA, FASTA/Newick I/O, for microbiome analysis.

synthetic-sciences/OpenScience Agent Skills author: synthetic-sciences Apache-2.0 2 files body ≈ 3 604 tokens Open the sourcegithub.com↗ analyzed 5 d ago

Biological data toolkit.

As a process C 56/100 · Has gaps — weak spots: inputs and preconditions, failures and branches, running it twice

ProcedureData and analyticsAI and agentstype and topics are labelled automatically from the skill text
Runs in: Claude / Claude Code ChatGPT / Codex Gemini CLI Cursor GitHub Copilot / VS Code Qwen Code Kimi Code CLI Z.ai (GLM) DeepSeek (Deep Code) Mistral Vibe LangChain (deepagents) OpenClaw Goose OpenCode
JSON
Technical rating
A
97/100
safety, quality, tests
Safety 60%
100
Quality 40%
92
Run on models
none yet
Process rating
C
56/100
Has gaps
Inputs and preconditions w 11
0
Failures and branches w 10
0
Progress reporting w 2
0
the three weakest of ten parameters · all ten

How to improve

    For the model run — optional
    • Your own cases (evals/evals.json, 4–6 real requests with expected answers): the full check would then run those instead of a model-drafted suite.
    • A spec.yaml with trigger phrases and assertions — a behaviour contract for CI; `skilltest init` writes a template.

    Guard findings · 0

    ✓ No critical or high findings

    Files scanned: 2. Evidence is masked. Grey chips explain why severity was lowered.

    Against the Agent Skills spec

    ✓ No remarks against the Agent Skills spec

    Process rating: all ten parameters 56/100

    • 0Inputs and preconditions. Does not say what the process needs to start
    • 0Failures and branches. Linear process with no failure handling
    • 0Progress reporting. Says nothing while it works
    • 30Running it twice. 1 mutating operations with no state check
    • 60Tools and files. Uses tools (python) that frontmatter does not declare
    • 60Result and completion. Output format stated, no completion criterion
    • 70When it triggers. States when to use, but not when not to
    • 85Steps. 122 steps, 2 vague phrases
    • 100Consistency. Name and required fields are in place
    • 100Execution cost. Instruction body is 3604 tokens

    Everything here is measured from the skill text rather than judged by a model, so the numbers are checkable. A parameter weighs more when it is a more common reason for the process to stall.

    Quality signals

    • +5Description has no quoted example phrases that should trigger the skill
    • +4Description does not say when NOT to use the skill (false activations)
    • +2Single-language instructions
    • +3Description length 189: enough signal without eating the budget
    • +4Structure: 21 headings
    • +3Step-by-step instructions: 122 items
    • +3Output format is stated explicitly
    • +4Has examples (11 code blocks)
    • +4Reference files are cited in the instructions (1 of 1)
    • +1License stated

    Quality base 70; lint remarks subtract, signals add up to 100. Result: 92.