CD synthetic-biology
Synthetic biology design and simulation tools. Codon optimization, gene circuit ODE modeling with growth feedback, SBML model creation, bifurcation analysis, barcode sequencing fitness analysis, and therapeutic genome engineering. For metabolic modeling use cobrapy; for sequence tools use biopython.
Synthetic biology design and simulation tools.
As a process D 47/100 · Unfinished process — weak spots: result and completion, when it triggers, inputs and preconditions
How to improve
- The SKILL.md body is over 5,000 tokens: move reference detail into references/ and load it when needed.
- Your own cases (evals/evals.json, 4–6 real requests with expected answers): the full check would then run those instead of a model-drafted suite.
- A spec.yaml with trigger phrases and assertions — a behaviour contract for CI; `skilltest init` writes a template.
Guard findings · 0
✓ No critical or high findings
Files scanned: 5. Evidence is masked. Grey chips explain why severity was lowered.
Against the Agent Skills spec
- warning
body-longSKILL.md body ≈ 5033 tokens (recommended < 5000); move details to references/
Process rating: all ten parameters 47/100
- 0Result and completion. Does not say what the result is
- 0Inputs and preconditions. Does not say what the process needs to start
- 0Progress reporting. Says nothing while it works
- 20When it triggers. No condition that starts the skill
- 30Running it twice. 1 mutating operations with no state check
- 50Failures and branches. 0 branches, has a failure section
- 60Tools and files. Uses tools (python) that frontmatter does not declare
- 70Execution cost. Instruction body is 5033 tokens
- 100Steps. 18 steps
- 100Consistency. Name and required fields are in place
Everything here is measured from the skill text rather than judged by a model, so the numbers are checkable. A parameter weighs more when it is a more common reason for the process to stall.
Quality signals
- +5Description has no quoted example phrases that should trigger the skill
- +4Description does not say when NOT to use the skill (false activations)
- +3Output format is not stated: the model decides each time
- -34 of 4 scripts are never mentioned in SKILL.md
- +2Single-language instructions
- +3Description length 300: enough signal without eating the budget
- +4Structure: 19 headings
- +3Step-by-step instructions: 18 items
- +4Has examples (11 code blocks)
- +1License stated
Quality base 70; lint remarks subtract, signals add up to 100. Result: 72.